BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F07LP1|AL427043
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1668 0.0
>3x_Contig1769
Length = 25795
Score = 1668 bits (841), Expect = 0.0
Identities = 862/865 (99%), Gaps = 3/865 (0%)
Strand = Plus / Plus
Query: 1 gatcaccagtcccgatgacagcaatgtaatctattacaagaacagattgatcacagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17173 gatcaccagtcccgatgacagcaatgtaatctattacaagaacagattgatcacagaact 17232
Query: 61 cgactttgaaaatgtcaagcgtgttcagagagcttgtatttatattgcttatgctgctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17233 cgactttgaaaatgtcaagcgtgttcagagagcttgtatttatattgcttatgctgctgt 17292
Query: 121 caaccaactgctaaatttggaaacggatccatctatgatcttggagtcgaatcagtcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17293 caaccaactgctaaatttggaaacggatccatctatgatcttggagtcgaatcagtcgac 17352
Query: 181 tgccactgctactaacatgggcaacggaactgccccttcatctgcagcatcttctcatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17353 tgccactgctactaacatgggcaacggaactgccccttcatctgcagcatcttctcatgc 17412
Query: 241 aaatgttgatggattagaccctatggaatcatgccacatatctttaaaaagaggtgaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17413 aaatgttgatggattagaccctatggaatcatgccacatatctttaaaaagaggtgaagt 17472
Query: 301 tttaggattcagagagttaggtcacttgataagcatcacgccatggcatttccatcgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17473 tttaggattcagagagttaggtcacttgataagcatcacgccatggcatttccatcgtgt 17532
Query: 361 ctttaaagtgatcactggtttaaccattcgtgaatatggtcaattgtgtgtcgaattttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17533 ctttaaagtgatcactggtttaaccattcgtgaatatggtcaattgtgtgtcgaattttt 17592
Query: 421 gaagaagaactgcagtttggtcaaccctgttaaaacaagagtagctaagttgaaggaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17593 gaagaagaactgcagtttggtcaaccctgttaaaacaagagtagctaagttgaaggaaaa 17652
Query: 481 cggtgattcttactcctgtcttgacgatgaaaatttcatgaacgatgatactgtcaagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17653 cggtgattcttactcctgtcttgacgatgaaaatttcatgaacgatgatactgtcaagta 17712
Query: 541 cgagtgtgatgacaactgtgtcattttacccgattacttcattgatttgaccaaatccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17713 cgagtgtgatgacaactgtgtcattttacccgattacttcattgatttgaccaaatccaa 17772
Query: 601 ggaatccaaaagaaaatcgaatgattctccaccatccagtgcaccttctaaccgttccgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17773 ggaatccaaaagaaaatcgaatgattctccaccatccagtgcaccttctaaccgttccgc 17832
Query: 661 taacaacggtattgatttcactagtgaaaacgattcatctaagaaccatcatccaacttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17833 taacaacggtattgatttcactagtgaaaacgattcatctaagaaccatcatccaacttc 17892
Query: 721 tgggttatcacgttcggaacagcgtaaacgcagaagctctgtaatgattcaaaagattag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17893 tgggttatcacgttcggaacagcgtaaacgcagaagctctgtaatgattcaaaagattag 17952
Query: 781 aaatgcatctatttgcactttctcatcgaacccctctattcaatctgctttgaataa-cc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 17953 aaatgcatctatttgcactttctcatcgaacccctctattcaatctgctttgaataaccc 18012
Query: 840 cggaa-ccctattc-aagctctgat 862
||||| |||||||| ||||||||||
Sbjct: 18013 cggaacccctattcaaagctctgat 18037
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6697
Number of Sequences: 1807
Number of extensions: 6697
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)